BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB006D05LP1|AL425522
(273 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1511 486 e-137
>3x_Contig1511
Length = 8569
Score = 486 bits (244), Expect = e-137
Identities = 252/256 (98%)
Strand = Plus / Plus
Query: 18 gtggctgagattgcgvttactcttggcttacgctatcgtgatgttggatcgggaaatgtt 77
|||||||| |||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4231 gtggctgaaattgcgatgactcttggcttacgctatcgtgatgttggatcgggaaatgtt 4290
Query: 78 gttggttttgatgatacatgttcgccggctgagacaaagggtaatgttggtgactattat 137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4291 gttggttttgatgatacatgttcgccggctgagacaaagggtaatgttggtgactattat 4350
Query: 138 tgatgtcattttctttcattagcaaagtattcactggcgggagctgtatcagaactcgga 197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4351 tgatgtcattttctttcattagcaaagtattcactggcgggagctgtatcagaactcgga 4410
Query: 198 cgttgtttgcggcagagagatcgcttttgggcttttcagcaacgcatcttttcgcctcga 257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4411 cgttgtttgcggcagagagatcgcttttgggcttttcagcaacgcatcttttcgcctcga 4470
Query: 258 ttgactctctgwcatt 273
||||||||||| ||||
Sbjct: 4471 ttgactctctgtcatt 4486
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1546
Number of Sequences: 1807
Number of extensions: 1546
Number of successful extensions: 40
Number of sequences better than 1.0e-20: 1
length of query: 273
length of database: 10,358,551
effective HSP length: 16
effective length of query: 257
effective length of database: 10,329,639
effective search space: 2654717223
effective search space used: 2654717223
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 49 (98.1 bits)